Bayesian Learning of Kernel Embeddings

Seth Flaxman, Dino Sejdinovic, John Cunningham Columbia University, Sarah Filippi
Proceedings of the 32nd Conference on Uncertainty in Artificial Intelligence, PMLR R14:405-414, 2016.

Abstract

Kernel methods are one of the mainstays of machine learning, but the problem of kernel learning remains challenging, with only a few heuristics and very little theory. This is of particular importance in methods based on estimation of kernel mean embeddings of probability measures. For characteristic kernels, which include most commonly used ones, the kernel mean embedding uniquely determines its probability measure, so it can be used to design a powerful statistical testing framework, which includes nonparametric two-sample and independence tests. In practice, however, the performance of these tests can be very sensitive to the choice of kernel and its lengthscale parameters. To address this central issue, we propose a new probabilistic model for kernel mean embeddings, the Bayesian Kernel Embedding model, combining a Gaussian process prior over the Reproducing Kernel Hilbert Space containing the mean embedding with a conjugate likelihood function, thus yielding a closed form posterior over the mean embedding. The posterior mean of our model is closely related to recently proposed shrinkage estimators for kernel mean embeddings, while the posterior uncertainty is a new, interesting feature with various possible applications. Critically for the purposes of kernel learning, our model gives a simple, closed form marginal pseudolikelihood of the observed data given the kernel hyperparameters. This marginal pseudolikelihood can either be optimized to inform the hyperparameter choice or fully Bayesian inference can be used.

Cite this Paper


BibTeX
@InProceedings{pmlr-vR14-flaxman16a, title = {{B}ayesian Learning of Kernel Embeddings}, author = {Flaxman, Seth and Sejdinovic, Dino and University, John Cunningham Columbia and Filippi, Sarah}, booktitle = {Proceedings of the 32nd Conference on Uncertainty in Artificial Intelligence}, pages = {405--414}, year = {2016}, editor = {Ihler, Alexander and Janzing, Dominik}, volume = {R14}, series = {Proceedings of Machine Learning Research}, month = {25--29 Jun}, publisher = {PMLR}, pdf = {https://raw.githubusercontent.com/mlresearch/r14/main/assets/flaxman16a/flaxman16a.pdf}, url = {https://proceedings.mlr.press/r14/flaxman16a.html}, abstract = {Kernel methods are one of the mainstays of machine learning, but the problem of kernel learning remains challenging, with only a few heuristics and very little theory. This is of particular importance in methods based on estimation of kernel mean embeddings of probability measures. For characteristic kernels, which include most commonly used ones, the kernel mean embedding uniquely determines its probability measure, so it can be used to design a powerful statistical testing framework, which includes nonparametric two-sample and independence tests. In practice, however, the performance of these tests can be very sensitive to the choice of kernel and its lengthscale parameters. To address this central issue, we propose a new probabilistic model for kernel mean embeddings, the Bayesian Kernel Embedding model, combining a Gaussian process prior over the Reproducing Kernel Hilbert Space containing the mean embedding with a conjugate likelihood function, thus yielding a closed form posterior over the mean embedding. The posterior mean of our model is closely related to recently proposed shrinkage estimators for kernel mean embeddings, while the posterior uncertainty is a new, interesting feature with various possible applications. Critically for the purposes of kernel learning, our model gives a simple, closed form marginal pseudolikelihood of the observed data given the kernel hyperparameters. This marginal pseudolikelihood can either be optimized to inform the hyperparameter choice or fully Bayesian inference can be used.}, note = {Reissued by PMLR on 04 October 2026.} }
Endnote
%0 Conference Paper %T Bayesian Learning of Kernel Embeddings %A Seth Flaxman %A Dino Sejdinovic %A John Cunningham Columbia University %A Sarah Filippi %B Proceedings of the 32nd Conference on Uncertainty in Artificial Intelligence %C Proceedings of Machine Learning Research %D 2016 %E Alexander Ihler %E Dominik Janzing %F pmlr-vR14-flaxman16a %I PMLR %P 405--414 %U https://proceedings.mlr.press/r14/flaxman16a.html %V R14 %X Kernel methods are one of the mainstays of machine learning, but the problem of kernel learning remains challenging, with only a few heuristics and very little theory. This is of particular importance in methods based on estimation of kernel mean embeddings of probability measures. For characteristic kernels, which include most commonly used ones, the kernel mean embedding uniquely determines its probability measure, so it can be used to design a powerful statistical testing framework, which includes nonparametric two-sample and independence tests. In practice, however, the performance of these tests can be very sensitive to the choice of kernel and its lengthscale parameters. To address this central issue, we propose a new probabilistic model for kernel mean embeddings, the Bayesian Kernel Embedding model, combining a Gaussian process prior over the Reproducing Kernel Hilbert Space containing the mean embedding with a conjugate likelihood function, thus yielding a closed form posterior over the mean embedding. The posterior mean of our model is closely related to recently proposed shrinkage estimators for kernel mean embeddings, while the posterior uncertainty is a new, interesting feature with various possible applications. Critically for the purposes of kernel learning, our model gives a simple, closed form marginal pseudolikelihood of the observed data given the kernel hyperparameters. This marginal pseudolikelihood can either be optimized to inform the hyperparameter choice or fully Bayesian inference can be used. %Z Reissued by PMLR on 04 October 2026.
APA
Flaxman, S., Sejdinovic, D., University, J.C.C. & Filippi, S.. (2016). Bayesian Learning of Kernel Embeddings. Proceedings of the 32nd Conference on Uncertainty in Artificial Intelligence, in Proceedings of Machine Learning Research R14:405-414 Available from https://proceedings.mlr.press/r14/flaxman16a.html. Reissued by PMLR on 04 October 2026.

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