On early extinction and the effect of travelling in the SIR model

Petra Berenbrink, Colin Cooper, Cristina Gava, David Kohan Marzagão, Frederik Mallmann-Trenn, Tomasz Radzik
Proceedings of the Thirty-Eighth Conference on Uncertainty in Artificial Intelligence, PMLR 180:159-169, 2022.

Abstract

We consider a population protocol version of the SIR model. In every round, an individual is chosen uniformly at random. If the individual is susceptible, then it becomes infected w.p. $\beta I_t/N$, where $I_t$ is the number of infections at time $t$ and $N$ is the total number of individuals. If the individual is infected, then it recovers w.p. $\gamma$, whereas, if the individual is already recovered, nothing happens. We prove sharp bounds on the probability of the disease becoming pandemic vs extinguishing early (dying out quickly). The probability of extinguishing early, $\Pr{\mathcal{E}_{ext}}$, is typically neglected in prior work since most use (deterministic) differential equations. Leveraging on this, using $\Pr{\mathcal{E}_{ext}}$, we proceed by bounding the expected size of the population that contracts the disease $\mathbf{E}\left[R_\infty\right]$. Prior work only calculated $\mathbf{E}\left[R_\infty | \overline{\mathcal{E}_{ext}}\right]$, or obtained non-closed form solutions. We then study the two-country model also accounting for the role of $\Pr{\mathcal{E}_{ext}}$. We assume that both countries have different infection rates $\beta^{(i)}$, but share the same recovery rate $\gamma$. In this model, each round has two steps: First, an individual is chosen u.a.r. and travels w.p. $p_{travel}$ to the other country. Afterwards, the process continues as before with the respective infection rates. Finally, using simulations, we characterise the influence of $p_{travel}$ on the total number of infections. Our simulations show that, depending on the $\beta^{(i)}$, increasing $p_{travel}$ can decrease or increase the expected total number of infections $\mathbf{E}\left[R_\infty\right]$.

Cite this Paper

BibTeX
@InProceedings{pmlr-v180-berenbrink22a, title = {On early extinction and the effect of travelling in the SIR model}, author = {Berenbrink, Petra and Cooper, Colin and Gava, Cristina and Kohan Marzag\~{a}o, David and Mallmann-Trenn, Frederik and Radzik, Tomasz}, booktitle = {Proceedings of the Thirty-Eighth Conference on Uncertainty in Artificial Intelligence}, pages = {159--169}, year = {2022}, editor = {Cussens, James and Zhang, Kun}, volume = {180}, series = {Proceedings of Machine Learning Research}, month = {01--05 Aug}, publisher = {PMLR}, pdf = {https://proceedings.mlr.press/v180/berenbrink22a/berenbrink22a.pdf}, url = {https://proceedings.mlr.press/v180/berenbrink22a.html}, abstract = {We consider a population protocol version of the SIR model. In every round, an individual is chosen uniformly at random. If the individual is susceptible, then it becomes infected w.p. $\beta I_t/N$, where $I_t$ is the number of infections at time $t$ and $N$ is the total number of individuals. If the individual is infected, then it recovers w.p. $\gamma$, whereas, if the individual is already recovered, nothing happens. We prove sharp bounds on the probability of the disease becoming pandemic vs extinguishing early (dying out quickly). The probability of extinguishing early, $\Pr{\mathcal{E}_{ext}}$, is typically neglected in prior work since most use (deterministic) differential equations. Leveraging on this, using $\Pr{\mathcal{E}_{ext}}$, we proceed by bounding the expected size of the population that contracts the disease $\mathbf{E}\left[R_\infty\right]$. Prior work only calculated $\mathbf{E}\left[R_\infty | \overline{\mathcal{E}_{ext}}\right]$, or obtained non-closed form solutions. We then study the two-country model also accounting for the role of $\Pr{\mathcal{E}_{ext}}$. We assume that both countries have different infection rates $\beta^{(i)}$, but share the same recovery rate $\gamma$. In this model, each round has two steps: First, an individual is chosen u.a.r. and travels w.p. $p_{travel}$ to the other country. Afterwards, the process continues as before with the respective infection rates. Finally, using simulations, we characterise the influence of $p_{travel}$ on the total number of infections. Our simulations show that, depending on the $\beta^{(i)}$, increasing $p_{travel}$ can decrease or increase the expected total number of infections $\mathbf{E}\left[R_\infty\right]$.} }
Endnote
%0 Conference Paper %T On early extinction and the effect of travelling in the SIR model %A Petra Berenbrink %A Colin Cooper %A Cristina Gava %A David Kohan Marzagão %A Frederik Mallmann-Trenn %A Tomasz Radzik %B Proceedings of the Thirty-Eighth Conference on Uncertainty in Artificial Intelligence %C Proceedings of Machine Learning Research %D 2022 %E James Cussens %E Kun Zhang %F pmlr-v180-berenbrink22a %I PMLR %P 159--169 %U https://proceedings.mlr.press/v180/berenbrink22a.html %V 180 %X We consider a population protocol version of the SIR model. In every round, an individual is chosen uniformly at random. If the individual is susceptible, then it becomes infected w.p. $\beta I_t/N$, where $I_t$ is the number of infections at time $t$ and $N$ is the total number of individuals. If the individual is infected, then it recovers w.p. $\gamma$, whereas, if the individual is already recovered, nothing happens. We prove sharp bounds on the probability of the disease becoming pandemic vs extinguishing early (dying out quickly). The probability of extinguishing early, $\Pr{\mathcal{E}_{ext}}$, is typically neglected in prior work since most use (deterministic) differential equations. Leveraging on this, using $\Pr{\mathcal{E}_{ext}}$, we proceed by bounding the expected size of the population that contracts the disease $\mathbf{E}\left[R_\infty\right]$. Prior work only calculated $\mathbf{E}\left[R_\infty | \overline{\mathcal{E}_{ext}}\right]$, or obtained non-closed form solutions. We then study the two-country model also accounting for the role of $\Pr{\mathcal{E}_{ext}}$. We assume that both countries have different infection rates $\beta^{(i)}$, but share the same recovery rate $\gamma$. In this model, each round has two steps: First, an individual is chosen u.a.r. and travels w.p. $p_{travel}$ to the other country. Afterwards, the process continues as before with the respective infection rates. Finally, using simulations, we characterise the influence of $p_{travel}$ on the total number of infections. Our simulations show that, depending on the $\beta^{(i)}$, increasing $p_{travel}$ can decrease or increase the expected total number of infections $\mathbf{E}\left[R_\infty\right]$.
APA
Berenbrink, P., Cooper, C., Gava, C., Kohan Marzagão, D., Mallmann-Trenn, F. & Radzik, T.. (2022). On early extinction and the effect of travelling in the SIR model. Proceedings of the Thirty-Eighth Conference on Uncertainty in Artificial Intelligence, in Proceedings of Machine Learning Research 180:159-169 Available from https://proceedings.mlr.press/v180/berenbrink22a.html.

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