Bayesian estimation of causal effects in Bayesian networks with local structure

Vera Kvisgaard, Johan Pensar
Proceedings of the 13th International Conference on Probabilistic Graphical Models, PMLR 343:473-496, 2026.

Abstract

We consider the problem of estimating causal effects from observational categorical data when the data-generating process can be modeled by an unknown causal Bayesian network with local dependence structure in its conditional distributions. Capturing local structure in a categorical Bayesian network may significantly reduce the number of parameters and facilitate the discovery of weak dependencies and edge orientation, which is crucial for causal inference. We extend the Bayesian IDA (BIDA) framework to Bayesian networks with local structure, focusing on a specific class of local independencies called context-specific independencies (CSI). To this end, we build upon previous work that combines Markov chain Monte Carlo methods over DAGs with deterministic greedy optimisation of CSI-trees to learn the full network structure, and propose a local approach for efficient estimation of pairwise causal effects in a given structure, where we apply the same greedy optimisation procedure to infer the conditional distributions involved in the backdoor formula. We evaluate the proposed method in a simulation study in which we simulate data from synthetic Bayesian networks with local structure, as well as a set of benchmark networks.

Cite this Paper


BibTeX
@InProceedings{pmlr-v343-kvisgaard26a, title = {{Bayesian} estimation of causal effects in {Bayesian} networks with local structure}, author = {Kvisgaard, Vera and Pensar, Johan}, booktitle = {Proceedings of the 13th International Conference on Probabilistic Graphical Models}, pages = {473--496}, year = {2026}, editor = {Camps-Valls, Gustau and Leonelli, Manuele and Varando, Gherardo}, volume = {343}, series = {Proceedings of Machine Learning Research}, month = {09--11 Sep}, publisher = {PMLR}, pdf = {https://raw.githubusercontent.com/mlresearch/v343/main/assets/kvisgaard26a/kvisgaard26a.pdf}, url = {https://proceedings.mlr.press/v343/kvisgaard26a.html}, abstract = {We consider the problem of estimating causal effects from observational categorical data when the data-generating process can be modeled by an unknown causal Bayesian network with local dependence structure in its conditional distributions. Capturing local structure in a categorical Bayesian network may significantly reduce the number of parameters and facilitate the discovery of weak dependencies and edge orientation, which is crucial for causal inference. We extend the Bayesian IDA (BIDA) framework to Bayesian networks with local structure, focusing on a specific class of local independencies called context-specific independencies (CSI). To this end, we build upon previous work that combines Markov chain Monte Carlo methods over DAGs with deterministic greedy optimisation of CSI-trees to learn the full network structure, and propose a local approach for efficient estimation of pairwise causal effects in a given structure, where we apply the same greedy optimisation procedure to infer the conditional distributions involved in the backdoor formula. We evaluate the proposed method in a simulation study in which we simulate data from synthetic Bayesian networks with local structure, as well as a set of benchmark networks.} }
Endnote
%0 Conference Paper %T Bayesian estimation of causal effects in Bayesian networks with local structure %A Vera Kvisgaard %A Johan Pensar %B Proceedings of the 13th International Conference on Probabilistic Graphical Models %C Proceedings of Machine Learning Research %D 2026 %E Gustau Camps-Valls %E Manuele Leonelli %E Gherardo Varando %F pmlr-v343-kvisgaard26a %I PMLR %P 473--496 %U https://proceedings.mlr.press/v343/kvisgaard26a.html %V 343 %X We consider the problem of estimating causal effects from observational categorical data when the data-generating process can be modeled by an unknown causal Bayesian network with local dependence structure in its conditional distributions. Capturing local structure in a categorical Bayesian network may significantly reduce the number of parameters and facilitate the discovery of weak dependencies and edge orientation, which is crucial for causal inference. We extend the Bayesian IDA (BIDA) framework to Bayesian networks with local structure, focusing on a specific class of local independencies called context-specific independencies (CSI). To this end, we build upon previous work that combines Markov chain Monte Carlo methods over DAGs with deterministic greedy optimisation of CSI-trees to learn the full network structure, and propose a local approach for efficient estimation of pairwise causal effects in a given structure, where we apply the same greedy optimisation procedure to infer the conditional distributions involved in the backdoor formula. We evaluate the proposed method in a simulation study in which we simulate data from synthetic Bayesian networks with local structure, as well as a set of benchmark networks.
APA
Kvisgaard, V. & Pensar, J.. (2026). Bayesian estimation of causal effects in Bayesian networks with local structure. Proceedings of the 13th International Conference on Probabilistic Graphical Models, in Proceedings of Machine Learning Research 343:473-496 Available from https://proceedings.mlr.press/v343/kvisgaard26a.html.

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